BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D11SP1|AL425862
(834 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1564 0.0
>3x_Contig1789
Length = 30977
Score = 1564 bits (783), Expect = 0.0
Identities = 819/834 (98%), Gaps = 4/834 (0%)
Strand = Plus / Plus
Query: 1 gatcccgaagaatgtatttggatgtatctttttcgccatggatgawcagaataaaggata 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 23722 gatcccgaagaatgtatttggatgtatctttttcgccatggatgaacagaataaaggata 23781
Query: 61 tttaaccatcaacgattggttccatttcaacaacatcttggagttcatatcaactaccat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 23782 tttaaccatcaacgattggttccatttcaacaacatcttggagttcaa--caactaccat 23839
Query: 121 ttgattgtattatatgagtttttcaggaagtttgatgtggcaaggatacgggcccgacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23840 ttgattgtattatatgagtttttcaggaagtttgatgtggcaaggatacgggcccgacaa 23899
Query: 181 acttcgtaatatcgatgatcaacgtgtgamatatatcaattatgggaathagttcctgag 240
|||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 23900 acttcg-aatatcgatgatcaacgtgtgaaatatatcaattatgggaataagttcctgag 23958
Query: 241 ttttgatgagctgtatttgaacgtcgatcagtttaagtccactatttcgttcttacaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23959 ttttgatgagctgtatttgaacgtcgatcagtttaagtccactatttcgttcttacaaaa 24018
Query: 301 atgcgttaacgatgaatttattatgamaaatgatttggctttgaattggaacgaatttcg 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 24019 atgcgttaacgatgaatttattatgaaaaatgatttggctttgaattggaacgaatttcg 24078
Query: 361 ttggttcccattttaccagtgtagtccgtttgggaaatcttcaggcacttatttctcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24079 ttggttcccattttaccagtgtagtccgtttgggaaatcttcaggcacttatttctcttt 24138
Query: 421 gawttcgctcgtcacgattttgcaaagcgatttgaaagtatgagaaaatgttcgttgggt 480
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 24139 gaattcgctcgtcacgattttgcaaagcgatttgaaag-atgagaaaatgttcgttgggt 24197
Query: 481 tcaataaattatgccatctgaacccatcgaaaaattgtcggacgctttccaagaaccagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24198 tcaataaattatgccatctgaacccatcgaaaaattgtcggacgctttccaagaaccagc 24257
Query: 541 tatcttaccttttgamattgttctattctcacagagtctcttcagatgttttcaattctt 600
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24258 tatcttaccttttgaaattgttctattctcacagagtctcttcagatgttttcaattctt 24317
Query: 601 tggwtttatccaacacaaagcttatcaaatgcgataacaattatwtccaatacaatgtca 660
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 24318 tggatttatccaacacaaagcttatcaaatgcgataacaattatatccaatacaatgtca 24377
Query: 661 tawaagacatattttatttatttgagaattttgatcttttgaaccaggtgcttatacgtt 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24378 taaaagacatattttatttatttgagaattttgatcttttgaaccaggtgcttatacgtt 24437
Query: 721 acgcacaatattacgaattcgatgagaacgatgtcagagagcaagtgattacgaagaggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24438 acgcacaatattacgaattcgatgagaacgatgtcagagagcaagtgattacgaagaggg 24497
Query: 781 actttatggagtttttgaataaagagtataacaaagtgacgwatattgtagagt 834
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 24498 actttatggagtttttgaataaagagtataacaaagtgacgaatattgtagagt 24551
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6638
Number of Sequences: 1807
Number of extensions: 6638
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 834
length of database: 10,358,551
effective HSP length: 16
effective length of query: 818
effective length of database: 10,329,639
effective search space: 8449644702
effective search space used: 8449644702
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)